Activity for proofs
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ogallard committed [bbdbdd]
New NoteBook for PTM reassignments in PSM files from P.D. v1.4 + ptmRS
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ogallard committed [351e5c]
Bugfixes, better handling of N and C Terminal PTMs, refactoring, and better fit of output data to requests.
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ogallard committed [0e06f0]
Repository initialization
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ogallard committed [bc5cb7]
Repository initialization 2
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ogallard committed [f7607c]
Very simple script for peaks xls file read
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ogallard committed [19d18e]
Excel KimBlast files simple import completed
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ogallard committed [a3728e]
Excel SequestPeptide files simple import on work
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ogallard committed [2209d0]
Excel SequestPeptide files simple import on work 2
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ogallard committed [751843]
Excel SequestPeptide files simple import and filtering completed
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ogallard committed [8b4b57]
Excel SequestPeptide files simple import and filtering rewrited
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ogallard committed [81d704]
Initiating multiple_sort(dict, list) function
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ogallard committed [48b74f]
Completed and tested multiple_sort(dict, list) function, and corrected minor bugs and 1 major bug in read_sequest_file()
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ogallard committed [ec1b46]
Add Joaquin suggestions. Initiating multiple_aling(list(dict(list)), list(tuples)) function
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ogallard committed [d539f7]
Added GPL v3 (LICENCE.txt)
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ogallard committed [b0e329]
New re-thinking multiple_aling(list(dict(list)), list(tuples)) function
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ogallard committed [9c6d21]
Final multiple_aling(list(dict(list)), list(tuples)) function. Debuging
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ogallard committed [61d74d]
Test write_report() function. Debuging
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ogallard committed [34c509]
All seems to work OK. But ugly output...
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ogallard committed [c2d213]
Minor changes in output, but it's still ugly...
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ogallard committed [b45171]
Changes in output xls function; now it's not so ugly...
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ogallard committed [1581cf]
Changes in output xls function of simple.py: more fault tolerant
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ogallard committed [500efd]
Reestructuration of simple.py project to EasyDataReport.
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ogallard committed [13ba89]
Added tag EasyDataReport v.0.9 Beta for changeset 500efd76cc2f
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ogallard committed [d9958d]
Reestructuration of simple.py project to EasyDataReport II
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ogallard committed [a0f182]
Added LICENCE.txt and renamed some TEE files
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ogallard committed [2510a0]
Added README.txt and INSTALL.txt
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ogallard committed [f9e2e1]
Modified location of tee.exe program
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ogallard committed [21043a]
Added dependencies for EasyDataReport
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ogallard committed [9eeecf]
Repository reorganization
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ogallard committed [b3b46d]
New Branch for Web LymPHOS v.1.5 quantitative data in Python + Django
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ogallard committed [ea0a11]
Learning Django 1.2.4
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ogallard committed [c1c210]
Learning Django 1.2.4
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ogallard committed [9d793f]
Learning Django 1.2.4 - Local static files and plain main page rendering with logo
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ogallard committed [1b33e8]
Minor changes
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ogallard committed [51731f]
Minor changes
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ogallard committed [b47b5a]
Minor changes
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ogallard committed [4648d6]
Learning Django 1.2.4 - CSS
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ogallard committed [4648d6]
Learning Django 1.2.4 - CSS
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ogallard committed [29d669]
Learning Django 1.2.4 - Template inheritance and static contents
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ogallard committed [3a6755]
Learning Django 1.2.4 - Changes in CSS and static contents
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ogallard committed [75a2fc]
Learning Django 1.2.4 - Minor changes and tests
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ogallard committed [0f7e99]
Learning Django 1.2.4 - Added fogotten template
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ogallard committed [12d42b]
Learning Django 1.2.4 - Stupid changes
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ogallard committed [88a32d]
Learning Django 1.2.4 - Minor changes and tests
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ogallard committed [c2c1cc]
Learning Django 1.2.4 - Add eclipse project data files
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ogallard committed [69fed9]
Learning Django 1.2.4 - Add eclipse project data files
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ogallard committed [9161ef]
Learning Django 1.2.4 - Minor changes in templates
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ogallard committed [a60813]
Learning Django 1.2.4 - Changes in templates and CSS
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ogallard committed [41c9a6]
Learning Django 1.2.4 - Revert after some failed tests
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ogallard committed [c7f185]
Learning Django 1.2.4 - All static contents on site and redesign of the StaticHTMLPage class
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ogallard committed [9e931c]
Learning Django 1.2.4 - Redesign of the Search page, the SideBar and CSSs
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ogallard committed [79d9c4]
Learning Django 1.2.4 - Redesign of view page Classes, modifications on templates and css, mock for results all peptides
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ogallard committed [05c39c]
Learning Django 1.2.4 - Modifications and corrections on templates and css for web_shots
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ogallard committed [5e87af]
Learning Django 1.2.4 - Modifications on templates and css, mock templates for the rest of sections
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ogallard committed [a8562e]
Learning Django 1.2.4 - Modifications and corrections on templates and css for web_shots II
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ogallard committed [2ef98e]
Learning Django 1.2.4 - Creation of lymphos app for models, and conection with MySQL database in settings
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ogallard committed [eb2c20]
Learning Django 1.2.4 - first models
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ogallard committed [b46c3f]
Learning Django 1.2.4 - Finally models validate and sql code can be generated!!
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ogallard committed [87427a]
Learning Django 1.2.4 - Small cahnges in models
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ogallard committed [812790]
Learning Django 1.2.4 - Sorry still no views for models... :( Only project restructuration
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ogallard committed [97467e]
Learning Django 1.2.4 - Small cahnges in models views -> No model views
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ogallard committed [86efa5]
Learning Django 1.2.4 - I don't understand django models....................
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ogallard committed [607121]
Learning Django 1.2.4 - logic SearchDB class improved, Small changes in models views and starting modification of peptide_result template
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ogallard committed [96f4c7]
Learning Django 1.2.4 - Cahnges in logic SearchDB class, Small changes in models and database, and improved, but not finished, views
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ogallard committed [62b579]
Learning Django 1.2.4 - Improved views: Browse all peptides view works, but not as spected, because orderin in Django is not case sensitive :(
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jabianmonux committed [304d80]
Fix problems with pepsearch results
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jabianmonux committed [77aa3e]
some refactorings, optimizations on PeptidResultPage.context_format()
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jabianmonux committed [9de5bd]
elimino helper method y lo embebo en context_format method
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ogallard committed [f75fc1]
Learning Django 1.2.4 - Starting Pepetide View
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ogallard committed [5a0bf6]
Learning Django 1.2.4 - More on Pepetide View
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ogallard committed [125b5f]
Learning Django 1.2.4 - Pepetide View: Mock Spectra Images
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ogallard committed [bb648e]
Learning Django 1.2.4 - Pepetide View: REAL Spectra Images from database
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ogallard committed [aa9af9]
Learning Django 1.2.4 - Quantitative data view in Peptide View and Peptide Results View. Peptide Search starts working
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ogallard committed [d0f7f3]
Learning Django 1.2.4 - Protein Browser works
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ogallard committed [9e835e]
Learning Django 1.2.4 - Peptide Search works (validator i user search to regex translator). Work started in Protein Browser
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ogallard committed [7694c5]
Learning Django 1.2.4 - Protein Search works, modified Peptide Results, added user input validation for searches
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ogallard committed [a31dd0]
Learning Django 1.2.4 - JsonFilter -> Maybe the dictionary idea is not a good idea: json files basically contain information only for Experiment model, and other table have to be generated separatelly... bufff
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ogallard committed [9feabb]
Learning Django 1.2.4 - Starting JsonFilter
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ogallard committed [1ae12a]
Learning Django 1.2.4 - Last update to JsonFilter before breaking with the old database from LymPHOS v1 and thus breaking all the code!!
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ogallard committed [83107a]
Added tag Last version compatible with LymPHOS v1 database for changeset 1ae12abf29e8
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ogallard committed [2386dd]
Learning Django 1.2.4 - Breaking with the old database from LymPHOS v1 and thus breaking all the code!! See Documentation directory for more info...
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ogallard committed [3fe018]
Learning Django 1.2.4 - Preparing new database and JSon input files. See updated Documentation directory for more info...
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ogallard committed [9c99bc]
Learning Django 1.2.4 - New Models and New DataBase. See updated Documentation directory for more info...
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ogallard committed [b7bc3e]
Learning Django 1.2.4 - Improving filters_json.py. Updated Documentation
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ogallard committed [6be7d8]
Learning Django 1.2.4 - Updating .sql, and new reprocessed json test2.db.zip acording to code in test2_db_generator.pyslices
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ogallard committed [8e2eb6]
Learning Django 1.2.4 - Improving filters.py and Importer class in logyc.py
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ogallard committed [3baf31]
Learning Django 1.2.4 - Improving models.py and Importer class in logyc.py, and changing .sql files
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ogallard committed [2ff7b0]
Learning Django 1.2.4 - Improving models.py filters.py and Importer class in logyc.py. Basic importing works from mini_test.db JSon
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jabianmonux committed [c4001f]
index does not work
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ogallard committed [8dfcc9]
Learning Django 1.2.4 - Improving Importer class in logyc.py, including Internet protein data fetch.
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ogallard committed [afcb6e]
Learning Django 1.2.4 - Improving filters.py. Add a pslyces test to run in a shell with Django settings for LymPHOS_v1_5 imported.
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ogallard committed [944c98]
Learning Django 1.2.4 - Importer class in logyc.py works correctly with a full JSon zipped database (full_exp_7_tio2_decimals.db.zip)
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ogallard committed [ec6d95]
Learning Django 1.2.4 - Improving filters.py. Start reimplementation of SearchDB in logic.py and Views.
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ogallard committed [722543]
Learning Django 1.2.4 - New changes in models.py, and changing .sql and documentation files
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ogallard committed [0bcd18]
Learning Django 1.2.4 - Minor changes in models.py and logic.py
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ogallard committed [c5ac8b]
Learning Django 1.2.4 - Complete new database implementation (sql, models.py and logic.py) working. See Documentation for definitive? information.
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ogallard committed [d1d421]
Learning Django 1.2.4 - Minor changes in models.py and logic.py. Starting work on views, to re-addapt them to the new DataBase
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ogallard committed [7d8cc8]
Learning Django 1.2.4 - PeptideView Browse All works again. Importer error with decoy prots and correct peptide naming (with s t y when phosporilated) corrected
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ogallard committed [a2e936]
Learning Django 1.2.4 - PeptideView and PeptideResults views work again. Working in ProteinResults view
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ogallard committed [62cc56]
Learning Django 1.2.4 - ProteinResults view fully works again. Working in ProteinView view -> Need new changes in models.Proteins