|
AltLinks.java
|
2022-08-29
|
Rastas Pasi M A
|
[7f3576]
FitStepFunction
|
|
ChainPaf.java
|
2024-12-12
|
Pasi Rastas
|
[429260]
ChainPaf, etc.
|
|
CleanMap.java
|
2024-08-22
|
Pasi Rastas
|
[b324b8]
java locale fix
|
|
ContigInterval.java
|
2021-04-01
|
Pasi Rastas
|
[e400b0]
numThreads, chain, etc.
|
|
CoverageAnalyser.java
|
2025-03-20
|
Pasi Rastas
|
[607af1]
liftover score fix, Map2Bed, etc.
|
|
CoverageHMM.java
|
2024-08-22
|
Pasi Rastas
|
[b324b8]
java locale fix
|
|
EstimateRecombination.java
|
2025-04-15
|
Rastas Pasi M A
|
[78dfa4]
automatic noChromosome
|
|
FindContigErrors.java
|
2021-02-01
|
Pasi Rastas
|
[8e1d3c]
Speedup, findContigErrors, markerAnnotation
|
|
FitStepFunction.java
|
2025-04-15
|
Rastas Pasi M A
|
[78dfa4]
automatic noChromosome
|
|
GammaFunction.java
|
2024-12-12
|
Pasi Rastas
|
[429260]
ChainPaf, etc.
|
|
GammaModel.java
|
2024-12-12
|
Pasi Rastas
|
[429260]
ChainPaf, etc.
|
|
GammaSprinkling.java
|
2024-12-12
|
Pasi Rastas
|
[429260]
ChainPaf, etc.
|
|
Input.java
|
2021-02-01
|
Pasi Rastas
|
[8e1d3c]
Speedup, findContigErrors, markerAnnotation
|
|
InputData.java
|
2022-04-08
|
Pasi Rastas
|
[bc5205]
Estimate recombination
|
|
LiftoverHaplotypes.java
|
2023-09-26
|
Pasi Rastas
|
[fb5d23]
ChainPaf etc.
|
|
Map2Bed.java
|
2025-03-20
|
Pasi Rastas
|
[607af1]
liftover score fix, Map2Bed, etc.
|
|
Marker.java
|
2025-03-20
|
Pasi Rastas
|
[607af1]
liftover score fix, Map2Bed, etc.
|
|
Misc.java
|
2024-05-21
|
Pasi Rastas
|
[390a50]
wrappers with markerSupport, ChainPaf
|
|
Normalise.java
|
2025-02-25
|
Rastas Pasi M A
|
[00103b]
FitStepFunction usage and snps
|
|
ParameterParser.java
|
2020-09-23
|
Pasi Rastas
|
[2a3a95]
Proximity data
|
|
PlaceAndOrientContigs.java
|
2025-03-20
|
Pasi Rastas
|
[607af1]
liftover score fix, Map2Bed, etc.
|
|
Proximity.java
|
2023-02-16
|
Pasi Rastas
|
[2ddbdf]
FitStepFunction keeps phase
|
|
ReversePaf.java
|
2024-12-12
|
Pasi Rastas
|
[429260]
ChainPaf, etc.
|
|
Support.java
|
2025-02-25
|
Rastas Pasi M A
|
[00103b]
FitStepFunction usage and snps
|