Jmol Code

minor logic simplification 836 lines

Jmol.___JmolVersion="14.20.2"

bug fix: write SDF and write MOL do not set atom parity field
bug fix: JavaScript JSmol broken for chirality due to bug in Clazz.clone(obj)

* 7/6/17 Jmol 14.20.1 major rewrite to correct and simplify logic; full validation
* for 433 structures (many duplicates) in AY236, BH64, MV64, MV116, JM, and L (839 lines)

Jmol.___JmolVersion="14.20.1"

new feature: BZ2 compressed file reader
-- uses org.apache.tools.bzip2.CBZip2InputStream v. 1.9.6
-- Apache license

bug fix: ADF reader not accepting Xx.name atom ids

bug fix: ADF reader not accepting Xx.name atom ids

bug fix: SMILES generator can show wrong @/@@ or stereochemical type for some allenes and cumulenes
bug fix: CIPChirality additional Rules 1b, 4b, and 4c fixes (substituted cubanes; multiple branched branches; 841 lines)

* 7/4/17 Jmol 14.20.1 major rewrite to correct and simplify logic; full validation
* for 433 structures (many duplicates) in AY236, BH64, MV64, MV116, JM, and L (840 lines)

840 line CIPChirality rewrite - streamlined logic

logic clean-up 908 lines

* 7/3/17 Jmol 14.20.1 major rewrite to correct and simplify logic; full validation
* for 433 structures (many duplicates) in AY236, BH64, MV64, MV116, JM, and L (949 lines)

Jmol.___JmolVersion="14.20.1"

new feature: BZ2 compressed file reader
-- uses org.apache.tools.bzip2.CBZip2InputStream v. 1.9.6
-- Apache license

bug fix: SMILES generator can show wrong @/@@ or stereochemical type for some allenes and cumulenes
bug fix: CIPChirality additional Rule 4b and 4c fixes