GUESS Git

fix morphing

edge labels

node labels should color based on background

> g.jkkLayout2()
None
java.lang.NullPointerException
        at edu.uci.ics.jung.visualization.contrib.KKLayoutInt.initializeLocation
s(KKLayoutInt.java:130)
        at edu.uci.ics.jung.visualization.AbstractLayout.initialize(AbstractLayo
ut.java:87)
        at com.hp.hpl.guess.Graph$1.run(Graph.java:461)
        at java.lang.Thread.run(Thread.java:534)

creation of node/edge betweenness, degrank, etc. returns an exception the first time.  They also violate the node field as default rule.

relate anchor sizes to node size (hard to grab nodes)

eflat77: the simplest way for weighted is to run DijkstraShortestPath for each vertex in a loop, thus:
eflat77: DijkstraShortestPath dsp = new DijkstraShortestPath(g, nev, cached);
eflat77: // g: graph, nev: way to get edge weights, cached: boolean that tells you whether the (partial) results will be cached for later use
eflat77: and then:
eflat77: Map distances = dsp.getDistanceMap(v);
eflat77: for each v in g.
eflat77: this will also work for unweighted graphs if nev is not specified (that is, just DijkstraShortestPath(g, cached), or just DSP(g)) but it's not the most efficient method. 


* Radial layout: asks for a central vertex.  If all vertices are
  assumed to have labels of some sort, perhaps throwing up a
  table/list of them (or giving an option for this) might be handy.
  As it is, I don't have any way of even guessing (so to speak) what
  the format is and naming a "random" vertex.

* A possibly useful display: show the number of vertices and edges
  (total, and those at least partially currently visible).  This lets
  users know how much they're missing (as it were) when they're way
  zoomed in.

* MDS layout is practically useless for this graph, it appears.

* find equivalent graphs - take each subgraph, order nodes by degree
  and generate a matrix, where two nodes have equal degree define a
  potential "transpose"... if two graphs have equivalent matricies,
  they're equal.

* nodes should have label by default

* nodes seem to forget about resizings when in edit mode

* bug in DRAW_EDIT_MODE, whole frame moves when dragged

* make special kind of pysequence as output of node-node that gives
  the "last" node.  This will let us "append"

* make pysequence behave like collection

* groupings... perhaps a cool (and easily implementable feature) is to
have a flag on D which tells it if it should 1) evaluated once, and
the cache, or 2) be re-evaluated on each access or add a method that
invalidates the cache in D, and a function that invalidates all
caches...?

2. use awt filedialog, not swing, on macs. check for System property os.name startsWithIgnoreCase("mac")
instead of the text field to the left of it, have a static text field with the result of the Choose file... dialog
and when you show the file name in the static text field, drop the path prefix and just show the file name
 if you really wnat to look right, OK and Cancel should be swapped positions on the mac.
it's what you'll need, but you have to modify the two .icns files to use your own icons (use photoshop to make them), and i moved your lib/ directory into Guess.app/Contents/Resources and renamed it to Java.
http://developer.apple.com/technotes/tn/tn2042.html

Begel Mac: ok, running
Begel Mac: what do i do once it's loaded
Begel Mac: i clicked on the rightmost tool at the bottom toolbar
Begel Mac: adn this panel popped open from the side
Begel Mac: but the buttons are all the wrong size and unviewable
Begel Mac: oh, it's not a button
Begel Mac: it was a tab, with only one tab that wasn't wide enough to show the label
Begel Mac: you need to pop open the left panel bigger
Begel Mac: when i click any tool in there, it keeps shrinking back to the original size
Begel Mac: that's bad
Begel Mac: what's this last button on the left panel?
Begel Mac: it's blank?
Begel Mac: your file menu is completely bogus

 here's part of it
 http://developer.apple.com/documentation/Java/Conceptual/Java14Development/index.html
 http://developer.apple.com/documentation/Java/Conceptual/Java131Development/index.html
 http://developer.apple.com/samplecode/OSXAdapter/OSXAdapter.html
 http://developer.apple.com/samplecode/AppleJavaExtensions/AppleJavaExtensions.html
 OSXAdapter shows you how to program against it
 the second one is the jar you need to cmopile against

http://developer.apple.com/samplecode/OSXAdapter/OSXAdapter.html

should rescale font on guesstextnodes to fit inside width/height bounds
-> have to draw a box around?

get weights to mean something to jung
-> option 1, push variable (e.g. weight) into userdatum (only do it once, but if data changes you lose) 
-> option 2, reroute queries for userdatum to __getattr_/__setattr__ (lots of DB queries)

collapse/uncollapse nodes...  

have a "manager" object that takes a new node name and a list of
nodes.  Listed nodes get deleted and all edges from them removed (keep
track of these).

foo.scratch* = whatever
(save data as scratch data, don't commit to DB)

demo to show pie charts as nodes

hulls don't update when nodes are removed/added

3d shadowbox on nodes

fix multiedge vis

copy edges

rename nodes, redirect edges
  - assume new name is non-existent in namespace
  - delete original name in namespace
  - low level call(s) in dbserver
  - hidden call in Node?

Different shaped hulls, maybe extend standard ones so they cover the
area a little better.