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For good measure, now specifying { verbose => 0 } in all cases where mkpath is called. In an experiment I ran recently, mkpath seemed to spuriously print the mkdir command to stdout, messing up the pipeline.

ben_langmead 2012-08-08

Browse code at this revision

Parent: [r90]

Child: [r92]

changed /myrna/CheckDirs.pl
changed /myrna/Get.pm
changed /myrna/MapWrap.pl
changed /myrna/MyrnaIface.pm
changed /myrna/ReduceWrap.pl
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/myrna/MyrnaIface.pm Diff Switch to side-by-side view
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/myrna/ReduceWrap.pl Diff Switch to side-by-side view
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