Bowtie Code

Brought to you by: ben_langmead, ch4rr0, ctrapnell, mcschatz

Commit [r64] Maximize Restore History

Tighter control over use of ENV. Environment is now purged at the top of all the map/reduce scripts, after Tools::initTools() and after copying %ENV into %env. All subsequent uses of the environment are either to set RHOME or to read other useful environment variables out of %env.

Authored by: ben_langmead 2012-07-15

Browse code at this revision

Parent: [r63]

Child: [r65]

changed	/myrna/AWS.pm
changed	/myrna/Align.pl
changed	/myrna/Assign.pl
changed	/myrna/Copy.pl
changed	/myrna/Counters.pl
changed	/myrna/Get.pm
changed	/myrna/Normal.pl
changed	/myrna/PostprocessMap.pl
changed	/myrna/PostprocessReduce.pl
changed	/myrna/Stats.pl
changed	/myrna/Summarize.pl
changed	/myrna/Tools.pm

/myrna/AWS.pm Diff Switch to side-by-side view

/myrna/Align.pl Diff Switch to side-by-side view

Bowtie Code

Commit [r64] Maximize Restore History

/myrna/AWS.pm Diff Switch to side-by-side view

/myrna/Align.pl Diff Switch to side-by-side view

/myrna/Assign.pl Diff Switch to side-by-side view

/myrna/Copy.pl Diff Switch to side-by-side view

/myrna/Counters.pl Diff Switch to side-by-side view

/myrna/Get.pm Diff Switch to side-by-side view

/myrna/Normal.pl Diff Switch to side-by-side view

/myrna/PostprocessMap.pl Diff Switch to side-by-side view

/myrna/PostprocessReduce.pl Diff Switch to side-by-side view

/myrna/Stats.pl Diff Switch to side-by-side view

/myrna/Summarize.pl Diff Switch to side-by-side view

/myrna/Tools.pm Diff Switch to side-by-side view