BANNER Named Entity Recognition System Code

Brought to you by: bleaman

Commit [r5] Maximize Restore History

Added OverlapOptions to control how mentions are flattened into a single labeling for sentence. Joined all executable classes into a single class. Several small bugfixes.

Authored by: bleaman 2010-02-23

Browse code at this revision

Parent: [r4]

Child: [r6]

changed	/trunk/config/banner_AZDC.xml
changed	/trunk/config/banner_AZDC_UMLS.xml
changed	/trunk/config/banner_BC2GM.xml
changed	/trunk/config/banner_BC2GM_TEST.xml
changed	/trunk/output/model_BC2GM.bin
changed	/trunk/scripts/test.sh
added	/trunk/src/banner/eval/BANNER.java
removed	/trunk/src/banner/eval/Base.java
removed	/trunk/src/banner/eval/DescribeDataset.java
removed	/trunk/src/banner/eval/Evaluate10by1.java
removed	/trunk/src/banner/eval/Evaluate2Fold.java
removed	/trunk/src/banner/eval/Performance.java
removed	/trunk/src/banner/eval/TestDictionary.java
removed	/trunk/src/banner/eval/TestModel.java
removed	/trunk/src/banner/eval/TrainModel.java
changed	/trunk/src/banner/eval/dataset/AZDCDataset.java
removed	/trunk/src/banner/eval/dataset/DatasetCombiner.java
changed	/trunk/src/banner/postprocessing/FlattenPostProcessor.java
changed	/trunk/src/banner/tagging/CRFTagger.java
changed	/trunk/src/banner/tagging/FeatureSet.java
changed	/trunk/src/banner/tagging/pipe/Pretagger.java
changed	/trunk/src/banner/tagging/pipe/Sentence2TokenSequence.java
changed	/trunk/src/banner/types/Sentence.java

/trunk/config/banner_AZDC.xml Diff Switch to side-by-side view

/trunk/config/banner_AZDC_UMLS.xml Diff Switch to side-by-side view

/trunk/config/banner_BC2GM.xml Diff Switch to side-by-side view

/trunk/config/banner_BC2GM_TEST.xml Diff Switch to side-by-side view

/trunk/output/model_BC2GM.bin

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/trunk/scripts/test.sh Diff Switch to side-by-side view

/trunk/src/banner/eval/BANNER.java Diff Switch to side-by-side view

/trunk/src/banner/eval/Base.java

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/trunk/src/banner/eval/DescribeDataset.java

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/trunk/src/banner/eval/Evaluate10by1.java

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/trunk/src/banner/eval/Evaluate2Fold.java

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/trunk/src/banner/eval/Performance.java

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/trunk/src/banner/eval/TestDictionary.java

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/trunk/src/banner/eval/TestModel.java

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/trunk/src/banner/eval/TrainModel.java

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/trunk/src/banner/eval/dataset/AZDCDataset.java Diff Switch to side-by-side view

/trunk/src/banner/eval/dataset/DatasetCombiner.java

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/trunk/src/banner/postprocessing/FlattenPostProcessor.java Diff Switch to side-by-side view

/trunk/src/banner/tagging/CRFTagger.java Diff Switch to side-by-side view

/trunk/src/banner/tagging/FeatureSet.java Diff Switch to side-by-side view

/trunk/src/banner/tagging/pipe/Pretagger.java Diff Switch to side-by-side view

/trunk/src/banner/tagging/pipe/Sentence2TokenSequence.java Diff Switch to side-by-side view

/trunk/src/banner/types/Sentence.java Diff Switch to side-by-side view