Search Results for "rough set matlab" - Page 3
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Showing 121 open source projects for "rough set matlab"
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JAABA
The Janelia Automated Animal Behavior Annotator
The Janelia Automatic Animal Behavior Annotator (JAABA) is a machine learning-based system that enables researchers to automatically compute interpretable, quantitative statistics describing video of behaving animals. Through our system, users encode their intuition about the structure of behavior by labeling the behavior of the animal, e.g. walking, grooming, or following, in a small set of video frames. JAABA uses machine learning techniques to convert these manual labels into behavior...">
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optPBN
An optimization toolbox for probabilistic Boolean networks
...Thereby optPBN allows for the identification of Boolean functions in the model from a given set of candidate Boolean rules which can be applied for network inference study. In addition, it also permits the determination of selection probabilities of Boolean rules in PBNs which can be further used to determine the influence of parent nodes in biochemical interactions. -
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EpidermalERKMAPK
Scripts for Modelling Human Epidermal ERK-MAPK Activation
...This code accompanies the publication: Cursons, J. et al (2015). Regulation of ERK-MAPK Signalling in Human Epidermis. BMC Systems Biology. doi: 10.1186/s12918-015-0187-6 The model was developed using a set the normalized-Hill differential equation framework, as specified by [Kraeutler, Soltis & Saucerman, (2002). BMC Systems Biology; doi: 10.1186/1752-0509-4-157]. This package includes: - MATLAB code containing the model definition, together with a script to perform non-linear least squares optimisation for a subset of parameters - python scripts which use libSBML to create an SBML representation of the model - SED-ML scripts which execute the SBML model under a range of conditions, produce output plots to recapitulate results shown in Cursons et al. (2015). -
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Vibrato Toolbox
Vibrato Toolbox: Parametric Analysis of Musical Vibrato
.... (1) We use some functions in MIR toolbox, please first add in this toolbox to MATLAB: https://www.jyu.fi/hum/laitokset/musiikki/en/research/coe/materials/mirtoolbox MATLAB/file -> set path add folder /Toolbox/ (and the folder for audio files) hit "save"; "close". (2) please also set the folder "F:\THISFOLDER" with code and audio files as "current directory" so the code can read the audio segment. -
Do not waste time with spreadsheetsAcuity PPM provides Senior Leaders and Project Management Teams (PMO's) with lightweight and easy-to-use software to manage the project portfolio. Acuity PPM helps you create and evaluate new project requests through prioritization, financial planning and resource management.
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These scripts demonstrate the ability of one-dimensional formulations to reproduce the axial strain field of tensile single-walled carbon nanotubes (SWCNTs). The LAMMPS scripts return the molecular mechanics solution for some armchair and zigzag SWCNTs, while the Matlab scripts compute the numerical solution of a one-dimensional integro-differential tensile rod by B-spline finite elements. By using the proper set of nonlocal parameters, it is possible to correctly capture size and chirality effects observed in the axial strain profile computed with molecular mechanics. Reference M. Malagù, E. ...
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DVB LDPC
Different LDPC Libraries for DVB-T2/S2
Provides more than one different set of LDPC encoder and decoder, mainly to work with the DVB-T2 Common Simulation Platform Be sure to read the Wiki! -
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The major aim of the Psychtoolbox 3 wrapper is to provide a set of basic tools that allow programming novices the use of the Psychophysics Toolbox without limiting the power and flexibility of the Psychophysics Toolbox and MATLAB.
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roughset
A little rough set API
Some rough set features implemented. -
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Face Recognition System
Face Recognition System Matlab source code
Research on automatic face recognition in images has rapidly developed into several inter-related lines, and this research has both lead to and been driven by a disparate and expanding set of commercial applications. The large number of research activities is evident in the growing number of scientific communications published on subjects related to face processing and recognition. Index Terms: face, recognition, eigenfaces, eigenvalues, eigenvectors, Karhunen-Loeve algorithm. -
Securden Windows Privilege ManagerRemove local administrator rights on Windows servers and endpoints. Seamlessly elevate applications for standard users. Grant time-limited rights on-demand. Control application usage by remote employees through whitelisting and blacklisting.
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MODLEM
rule-based, WEKA compatible, Machine Learning algorithm
...In result numeric attribute's conditions are more precise and closely describe the class. This algorithm contains some aspects of Rough Set Theory: the class definition can be described accordingly to its lower or upper approximation. For more information, see: Stefanowski, Jerzy. The rough set based rule induction technique for classification problems. In: Proc. 6th European Congress on Intelligent Techniques and Soft Computing, vol. 1. Aachen, 1998. s. 109-113. -
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Facial Expression Recognition
Facial Expression Recognition System - Matlab source code
We propose an algorithm for facial expression recognition which can classify the given image into one of the seven basic facial expression categories (happiness, sadness, fear, surprise, anger, disgust and neutral). PCA is used for dimensionality reduction in input data while retaining those characteristics of the data set that contribute most to its variance, by keeping lower-order principal components and ignoring higher-order ones. Such low-order components contain the "most important"... -
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REST4roots
Evaluation software for shovelomics images
Root Estimator for Shovelomics Traits (REST) is a software developed for an automated or semi automated high-throughput analysis of root system traits form high quality RGB pictures. Standardized image acquisition is strongly recommended and briefly described in the manual which you can get here for free http://plantscience.psu.edu/research/labs/roots/publications/overviews/next-generation-shovelomics-set-up-a-tent-and-rest -
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This repository was set up accompanying the publication 'Robot-Assisted Arm Assessments in Spinal Cord Injured Patients: A Consideration of Concept Study' in the PLOS ONE journal. This repository provides a sample assessment logging data set and its evaluation using a MATLAB evaluation routine. Furthermore, it encompasses the assessment parameter data of the five measured patients and the 24 healthy subjects participating in the study.
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CupidTool
Cupid: simultaneous reconstruction of miRNA-target and ceRNA networks
Chiu et. al., Genome Research 2014 Cupid is a method for simultaneous prediction of miRNA-target interactions and their mediated competitive endogenous RNA (ceRNA) interactions. We showed that our integrative approach significantly improves on miRNA-target prediction accuracy as assessed by both mRNA and protein level measurements in breast cancer cell lines. Cupid is implemented in 3 steps: Step 1: re-evaluate candidate miRNA binding sites in 3’ UTRs, as inferred by TargetScan,... -
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nail_systems_biology
NAIL is a toolset for network analysis in the life sciences
The NAIL (Network Analysis and Inference Library) project is a set of tools for solving problems in the life sciences using network (graph) approaches. NAIL includes methods for creating networks, analysing and comparing networks, and for visualising or presenting the results. These methods are designed as self-contained platform-independent components which can be called either from another program, or from a command line. Modelling biological systems as networks (graphs) is becoming a... -
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Ploidy Analysis
Tools for analyzing Candida albicans flow cytometry data.
A set of Matlab scripts defining two tools. The first tool ('Ploidy_analysis_5.m') loads FCS2.0 format flow cytometry datasets and perform cell cycle model fittings to the raw data, interactively producing one or more ploidy estimates per experimental dataset. The second tool ('Analyze_Aneuploidy.m') can be used to make estimates of likelihood of a certain number of extra chromosomes being responsible for an observed non-euploid ploidy estimate. -
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WaMoFi
Wa[velet] Mo[tif] Fi[nder]
WaMoFi: Is a method for finding protein motifs using the stored information from statistical contact potentials (aaindex) and the a representation by the continuous wavelet transform. Please use: R 3.1.0 and Matlab 2014 How to use: Just replace the directory and files In the head of the WaMoFi.m script. Then, run it in a matlab console. --dataset: your data set in a fasta file --labels: a file with the label/class per line --percTest: how much of the test will be used for finding the motifs?. 0.7 means the 70% of the sequences in each class are used to find the motifs, whereas, the 30% are used to validate those motifs. ... -
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SuperpixelMethod
Implementation of phase and amplitude modulation methods for the DMD
This is a tool set for controlling digital micromirror devices for creating digital holograms and general optical field patterns. Hardware requirements include a laser and a DMD development board. A description of the use of the software in digital holography can be found here: http://cops.nano-cops.com/publications/superpixel-based-spatial-amplitude-and-phase-modulation-using-digital-micromirror-devic This software was developed with support from ERC and FOM. -
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Inline fortran functions
Fortran emulation of Matlab inline functions
This is a set Fortran 2003 modules that allows to call "formula" objects that resemble the Matlab inline functions (also called "anonymous" or "lambda" functions in other languages). User can give a formula in a string and evaluate it through an eval procedure. The implementations take advantage of the Fortran 2003 procedure pointers to speed up the formula evaluation. -
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ArmaMx
SWIG typemaps to bind armadillo C++ matrices to Matlab
ArmaMx is a set of SWIG interface files which allows generating Matlab bindings to C++ code which uses the Armadillo matrix library. From within Matlab any Armadillo matrices are represented as native Matlab matrices. This is possible due to the same memory layout used. Copying of memory is avoided whenever possible. It also supports boost::shared_ptr wrapped return values of Armadillo matrices. -
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WM Hyperintensities Segmentation Toolbox
Open Source White Matter Hyperintensities Segmentation Toolbox
...Our toolbox provides a self-sufficient set of tools for segmenting these WMHs reliably and further quantifying their burden for down-processing studies. -
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mVision library is a set of functions related with computer vision programmed in Matlab. Also include a couple of GUIs for test visually the functions.
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Matlab VideoUtils
Matlab Toolbox for reading and writing videos.
Matlab Toolbox to process video files, which consists on a set of classes for reading, writing, correcting light changes and generating gaussian pyramids in real time. This toolbox is designed for Windows x64, Max OS X x64 and Linux x64. Through to use of Ffmpeg, it can reproduce and create videos very fast and also do no require to load the entire video file in memory. -
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finiteDiff
Program for solving the Schrödinger equation
This little set of programs compute the solutions to one and three dimensional Schrödinger equations with different potentials. Explicit, implicit and eigenvalue methods are included. The explicit and implicit method are provided in C++ whereas the matrix method is implemented as a MATLAB scipt. All these method use finite differences.