QAmiRSeq
A strand aware pipeline for accurate quantification of miRNAs/isomiRs
...All analyses results are organized in a user friendly manner, accessible via a web interface, and can be drilled down interactively by investigators or analysts to conduct further investigation and discovery. QAmiRSeq is a powerful and flexible open source tool for accurate quantification of known miRNAs/isomiRs from both small and large number of samples.
The software package, and the test run results for miRNA-seq dataset GSE64977(human), GSE65920(mouse) and GSE60900(rat) can be downloaded directly from https://sourceforge.net/projects/qamirseq/files/, and are also available online https://baohongz.github.io/QAmiRSeq/