Search Results for "plugin imagej"
Sort By:
Showing 22 open source projects for "plugin imagej"
View related business solutions-
Gen AI apps are built with MongoDB AtlasMongoDB Atlas is the developer-friendly database used to build, scale, and run gen AI and LLM-powered apps—without needing a separate vector database. Atlas offers built-in vector search, global availability across 115+ regions, and flexible document modeling. Start building AI apps faster, all in one place.
-
All Things Performance and Partner Marketing, All in One PlaceAutomatically tie revenue back to campaigns, channels, publishers, and networks through marketing attribution. Spend less time juggling reports, and more time optimizing for growth by using a single operating solution for partner and performance marketing.
-
1
TomoJ
ImageJ plugin to perform Electron Tomography
TomoJ is an ImageJ plug-in for tomographic reconstruction. It was designed for electron tomography, however any acquisition with parallel beam should work. TomoJ proposes the preprocessing and the registration of tilt-series prior to 3D reconstructions (WBP, ART, SIRT, OS-SART, compressed sensing). TomoJ is written in Java, the computations are multithreaded and reconstruction can be performed on CPU or GPU (OpenCL). registration is described in: Journal of Structural Biology: X.... -
2
SEM3De
ImageJ plugin to enhance stack of images acquired by SEM
-
3
ViralPlaque
A fast, open-source and versatile ImageJ macro for the automated dete
Plaque assay has been used for a long time to determine infectious titers. We present ViralPlaque, a fast, open-source and versatile ImageJ macro for the automated determination of viral plaque dimensions from digital images. Also, a machine learning plugin is integrated in the analysis algorithm for adaptation of ViralPlaque to the user’s needs and experimental conditions. A high correlation between manual and automated measurements of plaque dimensions was demonstrated. ... -
4
Undistorter
Lens radial distortion correction - ImageJ plugin
This ImageJ plugin uses the division model proposed by Bukhari, F.; Dailey, M. N. (2013) to undistort images. The user can manually set the parameters k1, k2, and k3. The user can also draw segmented lines. After, by clicking on the Optimize button, the software will attempt to undistort the image transforming the segmented lines into straight lines. -
Free Website Monitoring Service | UptimeRobotWith the Free Plan, you can monitor up to 50 URLs, check for a website's content (using the keyword monitor), ping your server or monitor your ports in 5-minute intervals. You can create a status page to showcase your uptime. SMS or Call alerts can be bought anytime.
-
5
SMlocalizer
CUDA based ImageJ plugin for single molecule localization microscopy
SMLocalizer is a CUDA enabled ImageJ plugin for single molecule localization microscopy. The plugin aims to be a user friendly and powerful alternative to currently availible softwares where most settings are iteratively obtained by the software, not the user. The current version handles 3D multichannel data in any format that can be loaded into ImageJ/ Fiji. 3D modalities supported are PRILM, Biplane, Double helix and astigmatism. -
6
clockscan
It is the Project for develop an ImageJ plugin
...Copy “Clock_Scan-1.0.1.jar” and “Multi_Clock_Scan-1.0.1.jar” or "Clock_Scan_combined-1.0.1.jar" and paste them into the ImageJ plugin directory. -
7
SmartRoot
Semi-automated root image analysis software
SmartRoot is a semi-automated image analysis software which streamlines the quantification of root growth and architecture for complex root systems. The software combines a vectorial representation of root objects with a powerful tracing algorithm which accommodates to a wide range of image source and quality. The software supports a sampling-based analysis of root system images, in which detailed information is collected on a limited number of roots selected by the user according to... -
8
Cell Sampler
Cell Sampling Plugin for ImageJ
Cell-Sampler is an ImageJ sampling plugin written in Java. It is designed to extract time series from microscopy images of oscillating cells expressing the GFP or Luciferase reporter molecule. This program was developed in the Piggin's Laboratory at the University of Manchester. Go to the Cell-Sampler Web Site for installation instructions and tutorial materials. -
9
iSBatch
Hyearchical Data Processing Plugin for ImageJ
iSBatch is a Java-based plugin for ImageJ (version 1.49d) or its distribution Fiji. iSBatch is designed for quick evaluation of analysis pipelines and visual exploration of datasets. It is distributed under an open open-source license (GNU General Public License, version 3). The plugin handles the data in a hierarchical fashion based on a source folder containing all data and little guidance provided by the user. -
Pylon is an All-in-one B2B Support Platform for modern B2B businesses.We bring together everything a post-sales teams team needs including a ticketing system, B2B omnichannel integrations (Slack Connect, Microsoft Teams), modern chat widget, knowledge base, AI support bot, account management, customer marketing, and more.
-
10
...A linear-time component-labeling algorithm using contour tracing technique. Computer Vision and Image Understanding, 93(2), 206–220. doi:10.1016/j.cviu.2003.09.002 The ImageJ *Shape Filter Plugin* (see downloads) uses this library for flitering the blobs by its shape. If you are using IJBlob in a scientific publication, please cite: Wagner, T and Lipinski, H 2013. IJBlob: An ImageJ Library for Connected Component Analysis and Shape Analysis. Journal of Open Research Software 1(1):e6, DOI: http://dx.doi.org/10.5334/jors.ae
-
11
IHC Profiler
A plugin for the quantitative analysis of Immunohistochemistry samples
Identification and scoring of cancer markers by Immunohistochemistry has been shown to be of value in determining the aggressiveness of specific cancers, as well as in predicting patient outcome for many cancer types. Despite its routine clinical use, a problem with the standard scoring method is the inherent subjectivity and variability of purely visual inspection. To diminish this visual perception biasing, IHC profiler has been developed as a standard automated scoring...">
-
12
-
13
Parallel Super-Resolution is a multithreaded ImageJ plugin for super-resolution. Super-resolution is an image fusion and reconstruction problem, where an improved resolution image is obtained from several geometrically warped, low resolution images.
-
14
-
15
Parallel HRRT Deconvolution is a multithreaded ImageJ plugin for motion correction of PET brain images.
-
16
Fourier Visualization
Fourier transform visualization using ImageJ
ImageJ Plugin for Fourier Transform visualization. Drawing sine and cose signals with different angles and frequencies to show how fourier transform behave. A video file animation can be created based on the images created by the plugin. -
17
VoltIJ (for VOLume viewing Tools for ImageJ) is a plugin for ImageJ allowing the 3D visualization of volumetric scalar data.
-
18
Yawi 3D (Yet Another Wand for ImageJ) implements a 3D selection tool plugin for ImageJ suitable for CT scanned images; it helps in the selection of 3D Region Of Interest (ROI) containing a tumor mass; it also provides a measure of ROI volume
-
19
Vascular Network Toolkit for ImageJ
A plugin for segmentation and analysis of images of vascular networks.
A plugin package for ImageJ that assists with quantification and characterization of vascular networks. The tool regularizes lighting, segments the vessels, and generates a skeletal description that reflects the biological structures of interest. -
20
SeedFill3D_
My first sourceforge project. Plugin for ImageJ
Plugin for ImageJ (Image Processing application). Maint target is develop 3D FloodFill tool for 3D stack images based on algorithm described in A rapid 3D seed-filling algorithm based on scan slice by Wei Wei You et al. Secondary targets is learn myself of Java, subversion and other. -
21
-
22
- Previous
- You're on page 1
- Next