Open Source Statistics Software - Page 3
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Random
Generation random numbers, words and elements
The application supports Russian and English languages. An application for generating random numbers, words and selecting a random element from a list. The simple interface ensures fast and convenient user interaction. - Random numbers: generation is possible in any range. - Random words: the application's vocabulary is about 10,000 words and will increase in future versions. - Random element: the number of elements in the list is not limited, all have an equal probability of selection. -
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mlpy
Machine Learning Python
mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and of GSL. mlpy provides high-level functions and classes allowing, with few lines of code, the design of rich workflows for classification, regression, clustering and feature selection. mlpy is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License version 3. mlpy is available both for Python >=2.6 and Python 3.X. -
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The new version of MinimPy (MinimPy2) is available for download at: https://osdn.net/dl/minimpy2/MinimPy2.zip Please send your feedback about this new version to mahmood.saghaei@gmail.com (include MinimPy2 in the subject) ============================================================ MinimPy is a desktop application program for sequential allocation of subjects to treatment groups in clinical trials by using the method of minimization. Comprehensive reference help is available at http://minimpy.sourceforge.net MinimPy has been fully described in the following article: Saghaei, M. and Saghaei, S. (2011) Implementation of an open-source customizable minimization program for allocation of patients to parallel groups in clinical trials. Journal of Biomedical Science and Engineering, 4, 734-739. doi: 10.4236/jbise.2011.411090. Available at: http://www.scirp.org/journal/PaperInformation.aspx?PaperID=8518
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mapgraph
Massively Parallel Graph processing on GPUs -- now part of Blazegraph
Mapgraph is SYSTAP’s disruptive new technology to exploit the main memory bandwidth advantages of GPUs. The early work was co-developed with the University of Utah SCI Institute and has its pedigree in the UINTAH software running on over 750M cores on the TITAN Super Computer. Today, SYSTAP has commercialized this technology into it’s Blazegraph Accelerator and Blazegraph HPC products. Checkout our options for GPU acceleration of graphs or contact us to learn more: https://www.blazegraph.com/product/gpu-accelerated/. The early work was released under the Apache 2 open source license and is available on here at Sourceforge. This work was (partially) funded by the DARPA XDATA program under AFRL Contract #FA8750-13-C-0002 and DARPA Contract #D14PC00029. -
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ARNU
Arredondamento de Números
Sistema de Apoio Didático Profissional. ARNU - Arredondamento de Números. O aplicativo ARNU tem por objetivo auxiliar na resolução de cálculos de arredondamento matemático, abordados de forma técnica, entregando ao usuário um resultado didático e objetivo, o motivo e as normas utilizadas. -
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Herramienta gratuita para crear estadísticas de forma sencilla. Estadística Fácil es una aplicación desarrollada para permitirte crear tablas al estilo de las de Excel.
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Eve Targeting Speed Calculator
Targeting Speed Calculator for Eve Online
Calculates Targeting speed from Scan Resolution and Signature Radius Signature Analysis is calculated as lvl5 Sensor Booster calculated as t2 with Scan Resolution script Sensor Amplifier calculated as t2 -
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FixMyNumbers
regression and variance analysis quickly calculate data
This software is designed to help student's regression and variance analysis quickly calculate data. -
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LDT
Automatic Time Series Analysis with Stationary VAR Models
LDT is designed for automatic time-series analysis. Current version focuses on stationary vector autoregressive models (VAR) and the related analyses such as forecasting and Granger causality. See the following paper for an application: See http://papers.ssrn.com/sol3/papers.cfm?abstract_id=2818213 -
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MCPerm: Monte Carlo SNP permutation
Monte Carlo permutation method for SNP multiple test correlation
MCPerm: A Monte Carlo permutation method for multiple test correlation in case-control association study Traditional permutation (TradPerm) test is an important non-parametric analysis method which can be treated as the gold standard for multiple testing corrections in case-control association study. However, it relies on the original single nucleotide polymorphism (SNP) genotypes and phenotypes data to perform a large number of random shuffles, and thus it is computationally intensive, especially for genome-wide association study (GWAS). To improve the calculation speed without changing the size of the TradPerm p-value, we developed a Monte Carlo permutation (MCPerm) method as an efficient alternative to TradPerm. Methods: MCPerm does not need to shuffle the original genotypes and phenotypes data. It uses Monte Carlo method, employs two-step hypergeometric distribution to generate the random number of genotypes (AA, Aa and aa) in cases and controls. -
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A windows Warhammer fantasy battles calculator. Calculates the probability that unit X breaks unit Y. Has the ability to calculate more than one round, e.g. calculate the probability that unit X breaks unit Y in round 2.
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ModularBipolynom
Modular Polynom manipulation in Java
XY modular Polynom manipulation in Java for calculating elliptic curves point order -
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NORTEM
Normalizador de Tempo
Sistema de Apoio Didático Profissional. NORTEM - Normalizador de Tempo. O aplicativo NORTEM tem por objetivo auxiliar na resolução de cálculos de conversão de tempo, entregando ao usuário um resultado didático e objetivo, mostrando passo a passo o desenvolvimento do problema. -
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OmicsSuite
OmicsSuite: a suite for multi-omics analysis and visualization.
OmicsSuite (https://github.com/OmicsSuite/, https://omicssuite.github.io), original name BioSciTools, a desktop program developed based on Java 11, aims to make new exploration and contribution to the development of bioinformatics, and realize data analysis and visualization in the fields of sequence analysis, multimomics (transcriptomics, genomics, protein omics, metabonomics, single cell), microbiology, clinical, etc. The program inherits the excellent interactive components, perfect analysis function and beautiful operation interface of HiPlot (https://hiplot.cn), which I developed based VUE.js and Node.js, etc. -
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RESULTS (RESULTS Evaluates Statistics Using Less Time and Space) is a lightweight, open-source statistical software package that provides similar functionality to other proprietary statistics packages.
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Robust Correlation Toolbox
Free Matlab toolbox to compute robust correlations
The Robust Correlation Toolbox is a free collection of Matlab functions allowing to visualize data in univariate and bivariate space, check assumptions of normality and homoscedasticity and compute Pearson's and Spearman's, percentage bend, and skipped correlations with bootstrapped confidence intervals - see http://www.frontiersin.org/Quantitative_Psychology_and_Measurement/10.3389/fpsyg.2012.00606/full -- code moved to https://github.com/CPernet/robustcorrtool -
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Statistics Calculator
Fast and Efficient Statistics Calculator
A simple program that calculates the mean, mode, range, quartiles and standard deviation of a set of input numbers. -
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The final build of this software now is distributed in R, embedded in "RedeR': an R/Bioconductor package for hierarchical and nested network analysis... more about RedeR: http://bioconductor.org/packages/2.9/bioc/html/RedeR.html
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gsasnp2
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
* GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2", Nucleic Acids Research, Vol. 46(10), e60(2018). * PubMed ID: 29562348 * DOI: 10.1093/nar/gky175 -> PLEASE MOVE OR MAKE A COPY OF 'DATA' FOLDER INTO YOUR INTENSIVE TEST FOLDER (I.E. LINUX, MAC OR WINDOWS SPECIFIED FOLDER) TO ALLOW THE PROGRAM TO FIND THE PREDESIGNED DATA. * UPDATE NOTE: -> Sep-1-2020: add an update for Ubuntu-20.04. You will need Boost library installed (sudo apt-get install libboost-all-dev) -> Mar-7-2018: revise header terms in the output file -
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imDEV
Tools for multivariate data visualization, exploration and analysis.
You may also like some newer work: http://createdatasol.com/ Project imDEV is an application of RExcel, which seamlessly integrates Excel and R for tasks focused on multivariate data visualization, exploration, and analysis. Interactive modules for dimensional reduction (imPCA), prediction (imPLS), feature selection, analysis of correlation (imCorrelations) and generation of networked structures (imGraph) provide an integrated environment for systems level analysis of multivariate data. -
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libfgen
Library for optimization using a genetic algorithm or particle swarms
libfgen is a library that implements an efficient and customizable genetic algorithm (GA). It also provides particle swarm optimization (PSO) functionality and an interface for real-valued function minimization or model fitting. It is written in C, but can also be compiled with a C++ compiler. Both Linux and Windows are supported. -
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minepy
Maximal Information-based Nonparametric Exploration
The minepy homepage has moved to http://minepy.readthedocs.io. The download page is now at https://github.com/minepy/minepy/releases. -
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psignifit is a toolbox to fit psychometric functions and test hypotheses on psychometric data. This is version 3 which will now predominantly support python.
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