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Showing 54 open source projects for "npdb-p"

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  • 1

    contools

    console tools, batch scripts, shell scripts, shell tools, utilities

    https://sourceforge.net/p/contools/contools/ci/master/tree/README.md https://sourceforge.net/p/contools/contools/ci/master/tree/README_EN.txt https://sourceforge.net/p/contools/contools/ci/master/tree/README_EN.deps.txt https://sourceforge.net/p/contools/contools/ci/master/tree/changelog.txt
    Downloads: 0 This Week
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  • 2
    photo trigger sunjob

    photo trigger sunjob

    фото триггер (high speed photo trigger)

    фотогаджеты, триггеры для скоростной фото съемки (периферия, датчики, исполнительные механизмы) Canon 1Ds mkII - Li-Po батарейный мод NP-E3 high-speed ф.тригеры: - Photo Trigger 1.x (2x555 chip) - Photoduino 2.x mod - CameraAxe 3.0.0.4 mod - контроллер эл.м. клапана - фото синхронизатор (по 1му и 2му пыху) - фото мост (photo gate) Photoduino https://kalanda.github.io/photoduino/ https://github.com/kalanda/photoduino CameraAxe3 http://www.glacialwanderer.com/hobbyrobotics/?p=325 Прочие, не фото-проекты, доработки, моды: AVR ISP MK2 Power Mod - программатор MK61 - прг.калькулятора MK51 - калькулятора JDS6600 Power Mod - генератор KORAD KA 3050D - блока питания Ploter / 2D графопостроитель
    Downloads: 4 This Week
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  • 3
    MisterHouse:   Home Automation with Perl
    ...It can respond to voice commands, web browsers, time of day, serial port and X10 data, external files, etc and can speak via Text to Speech engines. Support is on https://sourceforge.net/p/misterhouse/mailman/misterhouse-users/ and code is maintained on https://github.com/hollie/misterhouse
    Downloads: 2 This Week
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  • 4
    CSI-SQL-SimpleOps

    CSI-SQL-SimpleOps

    Perl Lib Database Connector

    * Introduction - This Module is a Library based Perl code. - The library build and execute SQL command on databases. * NOTE: - Before any implementation, we recommend details in WIKI (https://sourceforge.net/p/csi-sql-simpleops/wiki/) or the CPAN Perl Modules, see: https://metacpan.org/pod/SQL::SimpleOps * Support: The Support Service is FREE. Do you need support? Open a ticket and I will get back to you as soon as possible. * Professional Services: Do you need any FREE professional services to use? Open a ticket as "FAQ request" and I will get back to you as soon as possible. ...
    Downloads: 1 This Week
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  • 5
    CSI-Math-Notation-PostfixInfix

    CSI-Math-Notation-PostfixInfix

    Perl Lib Math Notation

    ... - Context validation can be implemented in item selection routines or data context validation, when it is possible to identify data to be selected or ignored in some data analysis process. * NOTE: - Before any implementation, we recommend details in WIKI (https://sourceforge.net/p/csi-math-notation-postfixinfix/wiki/) or the CPAN Perl Modules, see: https://metacpan.org/pod/Math::Notation::PostfixInfix * Support: The Support Service is FREE. Do you need support? Open a ticket and I will get back to you as soon as possible. * Professional Services: Do you need any FREE professional services to use? ...
    Downloads: 0 This Week
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  • 6

    android-backup-toolkit

    Collection of several utilities to work with android backups

    Project name: android-backup-toolkit URL: https://sourceforge.net/p/android-backup-toolkit/ License: various (see individual projects) Authors: various (see individual projects) This project is simply a compilation of the six following projects, both latest source code and binaries: * android-backup-extractor: https://sourceforge.net/projects/adbextractor/ * android-backup-splitter: https://sourceforge.net/p/adb-split/ * android-timestamp-keeper: https://sourceforge.net/projects/androidtimestampkeeper/ * helium-backup-extractor: https://sourceforge.net/p/heliumbackupextractor/ * no-adb-backup-app-lister: https://sourceforge.net/projects/no-adb-backup-app-lister/ * tar-binary-splitter: https://sourceforge.net/projects/tar-binary-splitter/ All the android utilities are bundled in a single package.
    Downloads: 14 This Week
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  • 7
    miRDP2

    miRDP2

    Accurately and fast analyzing microRNAs transcriptome in plants

    miRDeep-P2 (miRDP2) is developed to accurately and fast analyze microRNAs (miRNAs) transcriptome in plants. It is adopted from miRDeep-P (miRDP) with new strategies and overhauled algorithm. We have tested miRDP2 to analyze miRNA transcriptomes in such plants with gradually increased genome size as Arabidopsis, rice, tomato, maize and wheat. Compared with miRDeep-P and several other computational tools, miRDP2 processed NGS data with superior speed. By incorporating newly updated plant miRNA annotation criteria, the accuracy of miRDP2 is also markedly improved. ...
    Downloads: 5 This Week
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  • 8
    ...Currently to map 'informal gardening' and foraging for useful items on the street. Simple to set up and use. Can be parametrised for specific usage. Installation description, to be expanded in: https://sourceforge.net/p/datamap/wiki/Installation/
    Downloads: 0 This Week
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  • 9

    mapska

    The Murder Accountability Project's Serial Killer Algorithm

    A much improved Linux/Perl implementation of the Murder Accountability Project's Serial Killer Algorithm. This module was tested with the "SHR76_19.csv" available from www.murderdata.org/p/data-docs.html. This module provides functions to prepare the data, upload to a database and view the identified clusters. Download SHR76_19.csv (23/03/2021) - https://www.dropbox.com/s/ye37woe6et05qgs/SHR76_19.csv.zip?dl=1 For information on this algorithm and the Murder Accountability Project please visit: www.murderdata.org. ...
    Downloads: 0 This Week
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    FusionAuth: Authentication and User Management Software

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  • 10
    Integrator

    Integrator

    Integrates proteomic searches from multiple search engines

    Perl program that integrates proteomic searches from multiple search engines, and outputs LymPHOS2 input proteomic data file. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/integrator/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124
    Downloads: 1 This Week
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  • 11
    OmssaGUI

    OmssaGUI

    GUI front-end for OMSSA

    GUI front-end for the OMSSA proteomics search engine. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/omssagui/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124
    Downloads: 1 This Week
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  • 12
    SequestGUI

    SequestGUI

    GUI front-end to sequest.exe

    GUI front-end to sequest.exe proteomics search engine, developed in Perl. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/sequestgui/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. PROTEOMICS, 14(20), 2275–2279. https://doi.org/10.1002/pmic.201400124
    Downloads: 1 This Week
    Last Update:
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  • 13

    FastaTools

    Performs several operations to Fasta protein databases

    FastaTools performs several operations to Fasta protein databases. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/fastatools/code/ci/default/tree/README.md Or you can download the Documentation an Tutorial PDF file in the Files section: https://sourceforge.net/projects/fastatools.lp-csic-uab.p/files/FastaTools%20Documentation%20and%20Tutorials.pdf - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. ...
    Downloads: 1 This Week
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  • 14
    HiTerminalLogger

    HiTerminalLogger

    Color Hilighted Serial COM Console Reader & html report for Windows

    ...This tool can be a console alternative to the tools like HTerm and TerraTerm, it runs internally with the perl subsystem, which you don't need to care. In case the patthern file (with -p option) isn't given as the input, then the logs are printed with the default color (white) with the Timestamps for every new line of the Text. You do not need to install. Just download and run it in your bash console Terminal, that support ANSI coloring (like git bash for windows/ console2/ cmder), and run it.
    Downloads: 0 This Week
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  • 15
    PWMScan

    PWMScan

    A Web-based genome-wide Position Weight Matrix (PWM) Scanner

    ...The TF binding score for a given k-mer sequence is then obtained by simply adding up the base-specific scores at respective positions of the binding site. PWMScan takes as input a PWM, the background probabilities for the letters of the DNA alphabet, and a threshold score or a p-value. The search is carried out across the entire genome sequence. It can accept PWMs, such as those available in the Transfac or Jaspar databases as well as plain-text PWMs. It computes all occurrences of the PWM in the genome sequence for a given p-value threshold or cut-off. The match list is provided in various genome annotation formats, including BEDdetail, FPS, and SGA.
    Downloads: 2 This Week
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  • 16
    ...This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
    Downloads: 2 This Week
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  • 17

    LOCUST

    Custom Sequence Locus Typer

    A Custom Sequence Locus Typer for Classifying Microbial Genotypic and Phenotypic Attributes. Publication: Brinkac LM, Beck E, Inman J, Venepally P, Fouts DE, Sutton G. LOCUST: A Custom Sequence Locus Typer for Classifying Microbial Isolates. Bioinformatics (Oxford, England). 2017 Jan 27; https://www.ncbi.nlm.nih.gov/pubmed/28130240
    Downloads: 0 This Week
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  • 18

    PRay

    GUI for rayinvr modelling

    ...B., 1992, Seismic traveltime inversion for 2-D crustal velocity structure, Geophysical Journal International, 108(1), 16--34, 10.1111/j.1365-246X.1992.tb00836.x SYSTEM/USER REQUIREMENTS: - Linux/Mac OS X - You do need to be familiar with command line operations. - a running rayinvr installation DOWNLOAD AND INSTALLATION: Please use the svn repository to download the code: svn checkout svn://svn.code.sf.net/p/pray-plot-rayinvr/code/trunk/ path/to/your/installation To install follow the instructions in the downloaded file 'install.readme'
    Downloads: 0 This Week
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  • 19
    Personal File Manager for Linux/Unix
    pfm is a curses-based file manager in Perl. PLEASE NOTE: this project has moved to github. Find the latest version at: https://github.com/ruittenb/p-f-m
    Leader badge">
    Downloads: 6 This Week
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  • 20
    CMake BASIS

    CMake BASIS

    Build system And Software Implementation Standard

    ...Check out the web site for more information. The Git repository of this project is hosted on GitHub. Some interesting facts about this project can be found on Ohloh at https://www.ohloh.net/p/cmake-basis.
    Downloads: 0 This Week
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  • 21
    Skalax
    Dear all UPDATE Skalax using ActivePerl 5.16.3 UPDATE Ai Route method for move Config.txt and Timeouts.txt need to b fix manaully. route_step 8 for hi speed moveing or route_step 12 for INC agi moveing or route_step 15 for normal moveing Wiki : https://sourceforge.net/p/skalax/wiki/How%20to%20use%20EasyPlugin/ ai_talkAuto 3 ai_talkAuto_wait 3 ai_modifiedTalk_giveup 20 ai_route_npcTalk 3 Config.txt modifiedTalk 0 For the first user you have to setup perl 5.14.02 or perl 5.14.0.4 before and download fullsetup here https://sourceforge.net/projects/skalax/files/fullsetup/ Skalax is newbie Kore by Skalax Panama This project was developed from closed project name "tk". ...
    Downloads: 1 This Week
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  • 22
    Shoal

    Shoal

    A lot of fish in a shoal, in a gigantic scientific ocean.

    ...The Shoal shell needs your professional advice. Try get some help (if you want build the shoal library by yourself): https://sourceforge.net/p/shoal/wiki/Shoal%20Developer%20Guide/
    Downloads: 0 This Week
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  • 23
    Perl System Test
    ...It captures the return code of each remote process and interprets 0 as pass and everything else as fail, enabling it to run tests written in any language. The harness depends on a standard testbed descriptor to facilitate portability across testbeds. Read more on the project Wiki: https://sourceforge.net/p/perlsystemtest/wiki/Home/
    Downloads: 0 This Week
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  • 24
    miRNA Temporal Analyzer (mirnaTA)

    miRNA Temporal Analyzer (mirnaTA)

    Differential expression analysis tool for miRNAs in temporal studies

    ...To normalize data and remove technical variability, Normal Quantile Transformation (NQT) was used, and the normalized data is analyzed using linear regression model to locate any miRNAs which are differentially expressed in a linear manner. Any miRNAs with P-value<0.05 are considered statistically significant. Remaining miRNAs which did not fit in linear model are further analyzed in two different methods: (1) if the number of time points <3, CDF of the normal distribution, and (2) if the number of time points is >= 3, ANOVA is utilized. http://www.gigasciencejournal.com/content/3/1/20
    Downloads: 0 This Week
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  • 25
    InproTK

    InproTK

    An Incremental Spoken Dialogue Processing Toolkit

    InproTK is an Incremental Spoken Dialogue Processing Toolkit, that is, a toolkit to help you build dialogue systems that listen and talk incrementally, allowing for advanced interactional behaviour. Please see our Wiki for more information: http://sourceforge.net/p/inprotk/wiki/
    Downloads: 0 This Week
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