Search Results for "pymol-script-repo"
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Showing 168 open source projects for "pymol-script-repo"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Save up to 90% off rates for USPS, UPS, DHL Express, and more with the best multi-carrier shipping software for e-commerce businesses.Whether you're established or just getting started, Shippo is the best shipping software for growing e-commerce brands that need to save time and money, fulfill and ship at scale, and delight customers. Create shipping labels for all carriers & save money with discounted rates. See all your online sales channels in one place and automatically access discounted USPS and DHL Express rates, or use your own carrier accounts. Sign up is free and there are no monthly fees or cancellation fees.
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Open Source with Pradumna
Resources and materials to get yourself started with open source
Open Source guide, contains resources and materials to learn and get yourself started with Open Source, Git, and GitHub. Building the repo you need to get started with Open Source. This repo contains resources and materials to learn and get yourself started with Open Source, Git and GitHub. The repo content is divided into several Pages for better structuring, easy navigation and making learning easier. Contains 15 days of Twitter threads and blogs that I posted during the Bootcamp. ... -
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nanoGPT
The simplest, fastest repository for training/finetuning models
NanoGPT is a minimalistic yet powerful reimplementation of GPT-style transformers created by Andrej Karpathy for educational and research use. It distills the GPT architecture into a few hundred lines of Python code, making it far easier to understand than large, production-scale implementations. The repo is organized with a training pipeline (dataset preprocessing, model definition, optimizer, training loop) and inference script so you can train a small GPT on text datasets like Shakespeare or custom corpora. It emphasizes readability and clarity: the training loop is cleanly written, and the code avoids heavy abstractions, letting students follow the architecture step by step. ... -
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Docker-Zero-to-Hero
Repo to learn Docker with examples
...The style is beginner-friendly and frequently uses analogies and screenshots to make abstract concepts more relatable, for instance contrasting the size of an Ubuntu container image to a full VM. The repo also links to a full YouTube playlist, so you can learn via video while using the GitHub materials as a companion guide. -
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Docker Practice
Learn and understand Docker&Container technologies
Docker Practice is a curated GitHub repo by Yeasy that collects Docker hands-on exercises, tutorials, and examples aimed at helping users learn image building, networking, volumes, and container orchestration in real scenarios. -
Cortex: Boost Developer Coding SkillsCortex is a simple portal that helps developers work smarter by linking all your tools, setting clear rules, and slashing repetitive tasks. It speeds up onboarding, updates old code, and fixes issues fast. Over 100 big companies use it to save time and get better results.
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JSCamp InfoJobs
Content and exercises fromJSCamp InfoJobs
...It is organized into numbered modules like 00-html-css, 01-javascript, 02-react, 03-router-and-zustand, 04-node, 05-typescript, 06-inteligencia-artificial, 07-sql, 08-ci-cd, and 09-docker, mirroring the curriculum of the bootcamp.The README explains that students will build a complete project step by step throughout the bootcamp, applying each module’s lessons to a single real-world application, which is ideal for portfolio building. The repo also links to jscamp.dev, where the videos and course materials are hosted, and explains that access is free, with an optional paid certificate that includes extra support like CV review, exercise feedback, and exclusive workshops. Detailed installation requirements are listed (modern browser, VS Code, Live Preview extension, Node.js 20+, Git, Docker, etc. -
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LLM101n
LLM101n: Let's build a Storyteller
...The materials favor compact, readable code and incremental steps, so learners can verify each concept before moving on. You’ll see how data pipelines, batching, masking, and positional encodings fit together to train a small GPT-style model end to end. The repo often complements explanations with runnable notebooks or scripts, encouraging experimentation and modification. By the end, the focus is less on polishing a production system and more on internalizing how LLM components interact to produce coherent text. -
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MDN Learning Area
GitHub repo for the MDN Learning Area
learning-area is the official GitHub repository for the MDN Web Docs Learning Area, a collection of educational resources designed to teach core web development technologies. It contains the code examples referenced throughout MDN’s tutorials and articles, covering topics such as HTML, CSS, JavaScript, and web APIs. Each directory in the repository mirrors the module structure of the MDN Learning Area, allowing learners to follow along easily as they read through corresponding lessons. The... -
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Coding Interview University
A complete computer science study plan to become a software engineer
Coding Interview University is a multi-month self-study plan that grew from a short personal to-do list into a comprehensive roadmap for preparing technical interviews at large software companies. The author used this plan to transition into a Software Development Engineer role at Amazon and emphasizes that most learners will not need to study as many hours to succeed. The repository focuses on practical readiness over memorization, guiding you to learn core computer science topics to about... -
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Aprendiendo React
A course to learn React
...The code is organized into a projects workspace, managed with pnpm and TypeScript configuration files, reflecting how modern React apps are actually structured in production. In practice, you learn by following the classes and then exploring or modifying the corresponding project folders, so the repo works as both reference code and a playground. Because it is tied to weekly Twitch streams, the content evolves and is updated to reflect modern React patterns and best practices. -
Digital business card + lead capture + contact enrichmentShare digital business cards, capture leads, and enrich validated contact info - at events, in the field, and beyond. Powered by AI and our proprietary data engine, Popl drives growth for companies around the world, turning every handshake into an opportunity.
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Fast-Kubernetes
This repo covers Kubernetes with LABs: Kubectl, Pod, Deployment
Fast-Kubernetes is a practical, hands-on repository that explains Kubernetes concepts and walks users through dozens of bite-size labs and examples. The content is organized as Markdown how-tos and cheat-sheets covering core objects and workflows — Pods, Deployments, Services, ConfigMaps, Secrets, PV/PVC, StatefulSets, DaemonSets, Jobs/CronJobs, Ingress, affinity/taints, and more — plus command-line kubectl quick references. It also includes end-to-end cluster setup guides (kubeadm with... -
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Bats-core
Bash automated testing system
Bats is a TAP-compliant testing framework for Bash. It provides a simple way to verify that the UNIX programs you write behave as expected. A Bats test file is a Bash script with special syntax for defining test cases. Under the hood, each test case is just a function with a description. Bats is most useful when testing software is written in Bash, but you can use it to test any UNIX program. Test cases consist of standard shell commands. Bats makes use of Bash's errexit (set -e) option when running test cases. ... -
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Archbase
Open source version of "Fundamentals of Computer Architecture"
...The name “archbase” suggests that it could be a baseline architecture or reference templates for projects, possibly spanning front-end, back-end, or full stacks. The repo likely provides starter code, directory structures, configuration files, core modules, and guidelines that enforce certain architectural conventions (e.g. MVC, layered architecture, plugin systems). It might include sample modules or example features to demonstrate how to build on the base architecture, showing how to extend, override, or integrate components in a consistent manner. ... -
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jQuery Tips Everyone Should Know
A collection of tips to help up your jQuery game
The jQuery Tips Everyone Should Know repository is a community-maintained compendium of useful tips, tricks, and best-practices for using the venerable jQuery library effectively. Instead of treating jQuery as a black-box tool, the repo surfaces practical advice: from how to handle events more reliably, to proper ways of manipulating the DOM, optimizing performance (e.g. caching selectors), and dealing with common patterns like AJAX, dynamic elements, error handling, and more. For developers who still maintain or build projects using jQuery — especially those working on older codebases or needing cross-browser compatibility — this resource helps avoid subtle bugs, improve maintainability, and write cleaner, more predictable code. -
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Mall Learning
Tutorial and sample-code repository
...It’s aimed at developers who want to understand how to build scalable e-commerce systems rather than just copy-paste modules. With clearly organized “tiny” modules (mall-tiny-01 etc) the repo supports step-by-step incremental learning. -
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Ajenti 2
Ajenti Core and stock plugins
Ajenti is a Linux & BSD modular server admin panel. Ajenti 2 provides a new interface and a better architecture, developed with Python3 and AngularJS. Ajenti 2 can be easily installed with pip and the provided script. Picks up your current configuration and works on your existing system as-is, without any preparation. Does not overwrite your config files, options and comments. All changes are non-destructive. Includes lots of plugins for system and software configuration, monitoring and management. Ajenti 2 is easily extensible using Python. ... -
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Azure Data SQL Samples
Official Microsoft repository containing code samples for SQL Server
This GitHub repository contains code samples that demonstrate how to use Microsoft's Azure Data products including SQL Server, Azure SQL Database, Azure Synapse, and Azure SQL Edge. Each sample includes a README file that explains how to run and use the sample. Note that certain features like In-Memory OLTP are edition specific for SQL Server and would be possible to implement if the edition which supports that feature is being used to run the sample. Releases allow you to conveniently... -
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Think Python 2
LaTeX source and supporting code for Think Python, 2nd edition
ThinkPython2 is the repository for the second edition of Allen Downey’s Think Python textbook, which teaches programming fundamentals in Python to beginners. The code includes all of the example programs, exercises, and supplementary files referenced in the book, allowing learners to run the examples, experiment, and extend them. The repository contains clean, well-commented Python scripts that are easy to follow and map directly to chapters of the text, covering topics like variables,... -
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SpaceVim
A community-driven modular vim/neovim distribution
...After SpaceVim is installed, launch nvim or vim, all plugins will be downloaded automatically. The easiest way is to download install it. cmd and run it as administrator or install SpaceVim manually. If you want to use vim script to configure SpaceVim, please check out the bootstrap function section. The SpaceVim Documentation will introduce you to the main topics important to using SpaceVim. -
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Python Zero to Hero for DevOps Engineers
Learn Python from DevOps Engineer point of you
...The repository is organized into Day-01 through Day-19 folders plus a small sample app, which makes it very easy to follow in sequence like a bootcamp. The curriculum starts with Python installation, environment setup, and writing your first script, then quickly moves into data types, strings, regular expressions, variables, and functions. It places a strong emphasis on DevOps-specific use cases: environment variables, command-line arguments, configuration handling, and automating log analysis or user management tasks are all explicitly woven into the exercises. As you progress, you encounter increasingly rich Python features such as lists (with list comprehensions), dictionaries, sets, operators, and control flow, always tied back to practical automation or infrastructure examples. -
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Jmol
An interactive viewer for three-dimensional chemical structures.
...Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. Files can be transferred directly from several databases, including RCSB, EDS, NCI, PubChem, and MaterialsProject. Multiple files can be loaded and compared. A rich scripting language and a well-developed web API allow easy customization of the user interface. ...">
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gnuplot
A portable, multi-platform, command-line driven graphing utility
A famous scientific plotting package, features include 2D and 3D plotting, a huge number of output formats, interactive input or script-driven options, and a large set of scripted examples. -
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IMS Open Corpus Workbench
Indexing and query tools for very large text corpora
The IMS Open Corpus Workbench is a collection of tools for managing and querying large text corpora (100 M words and more) with linguistic annotations. Its central component is the flexible and efficient query processor CQP, which can be used interactively in a terminal session, as a backend e.g. from a Perl script, or through the Web-based GUI CQPweb.">
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Simple Turtle LOGO
Free Educational Tool for Beginner LOGO Coding (STEM Students / Kids)
SIMPLE TURTLE ================ Create simple LOGO programs with commands to control the Turtle and draw amazing images!! Use for STEM, Coderdojo or similar coding events. Recursive REPEAT statements. INSTANT ON / OFF = Turns on / off immediate execution of commands FD x = Forward x pixels BK x = Backward x pixels RT x = Right by x degrees LT x = Left by x degrees PU = Pen Up (Do not draw) PD = Pen Down (Draw) REPEAT x = Creates a loop to run x times which... -
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Science Olympiad Scoring System
Excel based scoring system for Science Olympiad tournaments
This is an Excel based scoring system for use at Science Olympiad tournaments. Versions have been in use since 2002 at tournaments all over the country. It is free for non-commercial use and modification. Please submit any bug reports or feature requests by emailing the author at the address listed on the Startup page in the workbook. Click on the green button above to download the current Div C version, or on the files link to get the Div B version (be sure to save to disk first, then... -
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...Change-log for MathMod-11.1 (16/06/2021) 1) Support of graphing functions with complex numbers Z=u+iv in 3D and 4D spaces (demo scripts: "Complex3D_xx" and "Complex4D_Saddle") 2) Added support for HSV (hue, saturation, brightness) coloring model (script: "Complex_Domain_Coloring") 3) Texture definitions (RGB and HSV) for parametric surfaces can now be expressed as functions of complex numbers 4) Added a software implementation for the OpenGL variable gl_FrontFacing (fixed an issue with GPU drivers on MacOSX Catalina). The activation of this patch is available from mathmodconfig.js ("OpenGlConfig"-->"GL_FrontFacingSupport"=false) or the GUI("Appearance"-->"OpenGL Front Surface Support") 5) Bug-fixes, code optimization and documentation update.