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Black Rat

Rattus rattus

Welcome to the Black Rat Portal within RGD. This portal contains links to data related to the Black Rat, Rattus rattus, and to tools that Black Rat researchers can use to find and analyze that data. Please feel free to contact us with suggestions for additional data or tools that would help advance your research.

“The black rat (Rattus rattus), also known as the roof rat, ship rat, or house rat, is a common long-tailed rodent of the stereotypical rat genus Rattus, in the subfamily Murinae. It likely originated in the Indian subcontinent, but is now found worldwide.
The black rat is black to light brown in color with a lighter underside. It is a generalist omnivore and a serious pest to farmers because it feeds on a wide range of agricultural crops. It is sometimes kept as a pet.”

Source: Wikipedia

Photo courtesy of Kevin R. Grazier Ph.D.


Ontomate: Concept-Based Literature Search


Ontomate: pre-filtered for Black Rat literature

RGD’s Black Rat
Disease Genes

RGD Disease Browser

RGD’s Pathway Annotations

Gene Ontology Annotations

RGD’s Black Rat Download Site

Tools for Black Rat Data Analysis


Black Rat JBrowse2
Genome Browser

OLGA:
Object List Generator & Analyzer

MOET:
Multi Ontology Enrichment Tool

GA Tool:
Annotation Search and Export

GOLF:
Gene and Ortholog Location Finder

InterViewer – Protein Interactions

Genome and Gene Resources


RGD’s Genome Information
Page for Black Rat

Black Rat Taxonomy Page


Black Rat Species Browser


Black Rat Genome Page


Rattus rattus Assembly Page

Ensembl’s Black Rat
Information Page


Black Rat Assembly, Gene
Annotation and Statistics
at Ensembl



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.