diff --git a/WORKFLOW.md b/WORKFLOW.md index 5a1dc7e8697ca01fbb5322b3a552be32e18b39e2..cd74e44d21b62028df4a634fa6c93bf3fbabbff6 100644 --- a/WORKFLOW.md +++ b/WORKFLOW.md @@ -345,7 +345,7 @@ robot reduce \ ``` robot annotate \ --input results/ontoavida-reduced.owl \ - --version-iri "http://purl.obolibrary.org/obo/ontoavida-v2012-08-12.owl" \ + --version-iri "http://purl.obolibrary.org/obo/ontoavida-v2012-08-23.owl" \ --output results/ontoavida-annotated.owl ``` diff --git a/modules/object_property_module-annotated.owl b/modules/object_property_module-annotated.owl index 77e8dec093d430ccb40d6a235ebf0f203b46f9f9..d4d3759490c9a6d3c94dcfb4a8bf0adf9dd3889d 100644 --- a/modules/object_property_module-annotated.owl +++ b/modules/object_property_module-annotated.owl @@ -1,6 +1,6 @@ - - + Ontology module to be added to the ontoavida-edit ontology Ontology module from the object_property template OntoAvida by https://fortunalab.org is licensed under CC BY 4.0. @@ -27,6 +27,15 @@ + + + + + + + + + diff --git a/modules/object_property_module.owl b/modules/object_property_module.owl index 1aebb42ba761856f953788659a9e82ed2a39b6b0..49095b66b65252cf6ec0d631673ee7e5a20528c2 100644 --- a/modules/object_property_module.owl +++ b/modules/object_property_module.owl @@ -21,6 +21,15 @@ + + + + + + + + + diff --git a/ontoavida-edit.owl b/ontoavida-edit.owl index b2fb239e8c4fcb86ba0dbd1a9691744e58bf6ee5..52aeec9d87272c85e6c894c9d947849c8fb1f56c 100644 --- a/ontoavida-edit.owl +++ b/ontoavida-edit.owl @@ -72266,57 +72266,6 @@ More information can be found at https://obofoundry.org/ontology/ontoavida.html< - - - - - An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO). - Chris Mungall - http://www.ncbi.nlm.nih.gov/pubmed/19278549 - This relation groups a pair of inverse relations, parasite of and parasitized by - - interacts with via parasite-host interaction - - - - - - - - - - - - - Pediculus humanus capitis parasite of human - Chris Mungall - parasitizes - direct parasite of - - parasite of - http://eol.org/schema/terms/parasitizes - - - - - - - - - - - - Chris Mungall - has parasite - parasitised by - directly parasitized by - - parasitized by - http://eol.org/schema/terms/hasParasite - - - - + An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO). Chris Mungall diff --git a/results/ontoavida-merged.owl b/results/ontoavida-merged.owl index 3bf0ff3ced529bdb38cf0abc856cabd54f92616d..d399640ed87e97a346dc127f73903692f43a787a 100644 --- a/results/ontoavida-merged.owl +++ b/results/ontoavida-merged.owl @@ -72269,6 +72269,7 @@ More information can be found at https://obofoundry.org/ontology/ontoavida.html< + An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO). Chris Mungall diff --git a/results/ontoavida-reasoned.owl b/results/ontoavida-reasoned.owl index 3bf0ff3ced529bdb38cf0abc856cabd54f92616d..d399640ed87e97a346dc127f73903692f43a787a 100644 --- a/results/ontoavida-reasoned.owl +++ b/results/ontoavida-reasoned.owl @@ -72269,6 +72269,7 @@ More information can be found at https://obofoundry.org/ontology/ontoavida.html< + An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO). Chris Mungall diff --git a/results/ontoavida-reduced.owl b/results/ontoavida-reduced.owl index 3bf0ff3ced529bdb38cf0abc856cabd54f92616d..d399640ed87e97a346dc127f73903692f43a787a 100644 --- a/results/ontoavida-reduced.owl +++ b/results/ontoavida-reduced.owl @@ -72269,6 +72269,7 @@ More information can be found at https://obofoundry.org/ontology/ontoavida.html< + An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO). Chris Mungall diff --git a/results/ontoavida-relaxed.owl b/results/ontoavida-relaxed.owl index 3bf0ff3ced529bdb38cf0abc856cabd54f92616d..d399640ed87e97a346dc127f73903692f43a787a 100644 --- a/results/ontoavida-relaxed.owl +++ b/results/ontoavida-relaxed.owl @@ -72269,6 +72269,7 @@ More information can be found at https://obofoundry.org/ontology/ontoavida.html< + An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO). Chris Mungall diff --git a/templates/object_property_template.tsv b/templates/object_property_template.tsv index 883b8ca8e67767b251a1653c8a6f1e8869267989..97d058472326a5bc876285e1db64dcd8d78a0603 100644 --- a/templates/object_property_template.tsv +++ b/templates/object_property_template.tsv @@ -1,4 +1,5 @@ term identifier label textual definition type subproperty inverse property characteristic domain range ID LABEL A IAO:0000115 TYPE SP % IP % CHARACTERISTIC DOMAIN RANGE +RO:0002443 object property owl:topObjectProperty symmetric RO:0002444 object property asymmetric ONTOAVIDA:00000018 ONTOAVIDA:00000017 RO:0002445 object property asymmetric ONTOAVIDA:00000017 ONTOAVIDA:00000018