Commits · dev · ELLA / ELLA anno

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Nov 04, 2025
- Merge branch '174-use-unique-tempfile-for-sourcing-in-annotation-command' into 'dev' · 4c76d266
  Vetle Simensen authored Nov 04, 2025
  4c76d266
Nov 03, 2025
- Use unique tempfile for target source. · bce2c842
  Vetle Simensen authored Nov 03, 2025
  bce2c842
Oct 13, 2025
- Merge branch '172-update-clinvar-20251006-october' into 'dev' · e09bf31c
  Marieke Cecilia van Eggelen authored Oct 13, 2025
  e09bf31c
- Update Clinvar to october version · a5e965fc
  Marieke Cecilia van Eggelen authored Oct 13, 2025
  
  a5e965fc
Oct 10, 2025
- Merge branch '170-brittle-sources-json-lookup-in-ci-tests' into 'dev' · c3292c0f
  Francesco Bettella authored Oct 10, 2025
  c3292c0f
Oct 08, 2025
- Lint script · b5575762
  Francesco Bettella authored Oct 08, 2025
  
  b5575762
- Add verbose flag to linter · aa8ba431
  Francesco Bettella authored Oct 08, 2025
  
  aa8ba431
- Read RefSeq version from `version` file · 090f1662
  Francesco Bettella authored Oct 08, 2025
  
  090f1662
- Add RefSeq `version` file · 0a88da5b
  Francesco Bettella authored Oct 08, 2025
  
  0a88da5b
- Revert RefSeq patch · b5dc17f7
  Francesco Bettella authored Oct 08, 2025
  
  b5dc17f7
Oct 02, 2025
- Merge branch '167-use-poetry-instead-of-pipenv' into 'dev' · 5b190c95
  Ksenia Lavrichenko authored Oct 02, 2025
  5b190c95
- Pin poetry version to 2.2.1 · f8599567
  Øyvind Evju authored Oct 02, 2025
  
  f8599567
Oct 01, 2025
- Merge branch '169-update-clinvar-20250904' into 'dev' · 7a351a8e
  Ksenia Lavrichenko authored Oct 01, 2025
  7a351a8e
- Merge branch 'fix-ci-release-again' into 'dev' · dd383c70
  Francesco Bettella authored Oct 01, 2025
  dd383c70
- Update ClinVar September 2025 · 2048ffb2
  Marieke Cecilia van Eggelen authored Oct 01, 2025
  
  2048ffb2
Sep 23, 2025
- Merge branch '165-faulty-backup-restore-functionality' into 'dev' · 9be6989d
  Francesco Bettella authored Sep 23, 2025
  9be6989d
- Avoid deprecation warning · cf76e69e
  Francesco Bettella authored Sep 23, 2025
  
  cf76e69e
- Revert misguided `popd` · 51cf31e7
  Francesco Bettella authored Sep 23, 2025
  
  51cf31e7
- Cosmetics · 9445ecea
  Francesco Bettella authored Sep 23, 2025
  
  9445ecea
Sep 19, 2025
- Add back lint test · b4e159d4
  Øyvind Evju authored Sep 19, 2025
  
  b4e159d4
- Remove all references to pipenv · de493ed0
  Øyvind Evju authored Sep 19, 2025
  
  de493ed0
- Reorder dependencies · a6f89a23
  Øyvind Evju authored Sep 19, 2025
  
  a6f89a23
- Remove secondary packages · 3c06a98b
  Øyvind Evju authored Sep 19, 2025
  
  3c06a98b
- Again ensure that packages are equal with dev · e0a75f13
  Øyvind Evju authored Sep 19, 2025
  
  e0a75f13
- Add poetry.lock · 0e5ea02f
  Øyvind Evju authored Sep 19, 2025
  
  0e5ea02f
- Ensure packages installed are equal with dev · 3831663f
  Øyvind Evju authored Sep 19, 2025
  
  3831663f
Sep 18, 2025
- Replace Pipenv with poetry · b045bb45
  Øyvind Evju authored Sep 18, 2025
  
  b045bb45
- Add `popd` · 6499053f
  Francesco Bettella authored Sep 18, 2025
  
  6499053f
- Align `rm` command verbosity · c70d4b82
  Francesco Bettella authored Sep 18, 2025
  
  c70d4b82
- Ensure temporary backup removal · 595df16d
  Francesco Bettella authored Sep 18, 2025
  
  595df16d
- Restore relative reference · 72649205
  Francesco Bettella authored Sep 18, 2025
  
  72649205
- Move stuff around · a763ba98
  Francesco Bettella authored Sep 18, 2025
  
  a763ba98
- Run only on success · b2df6254
  Francesco Bettella authored Sep 18, 2025
  
  b2df6254
- Remove line · 3c79c2d8
  Francesco Bettella authored Sep 18, 2025
  
  3c79c2d8
- Ensure resources are released · f0530b35
  Francesco Bettella authored Sep 18, 2025
  
  f0530b35
- Check files existence in archive · 77815a0e
  Francesco Bettella authored Sep 17, 2025
  
  77815a0e
- Prevent ownership/permission surprises · c92d93b1
  Francesco Bettella authored Sep 17, 2025
  
  c92d93b1
Sep 17, 2025
- Add single quotes · 38187dc0
  Francesco Bettella authored Sep 17, 2025
  
  38187dc0
- Restrict deletion to newer files and directories · 54947fb1
  Francesco Bettella authored Sep 17, 2025
  
  54947fb1
- Lock `ANNO_DATA` during unpack · 9331cf9e
  Francesco Bettella authored Sep 17, 2025
  
  9331cf9e